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The GOR method is based on the “propensity” of each residue to be in one of the two conformational states, helix (H), strand(E).

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The GOR method is based on the “propensity” of each residue to be in one of the two conformational states, helix (H), strand(E).

(a) True

(b) False

I got this question in an interview.

My query is from Protein Secondary Structure Prediction  for Globular Proteins topic in chapter Secondary Structure Prediction of Bioinformatics

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Right option is (b) False

Easy explanation: The GOR method is based on the “propensity” of each residue to be in one of the two conformational states, helix (H), strand(E), turn(T), and coil (C). However, instead of using the propensity value from a single residue to predict a conformational state, it takes short-range interactions of neighboring residues into account.

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