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BLAST often produces several short HSPs rather than a single aligned region.

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BLAST often produces several short HSPs rather than a single aligned region.

(a) True

(b) False

I have been asked this question by my school principal while I was bunking the class.

My query is from Comparison of FASTA and BLAST topic in portion Database Similarity Searching of Bioinformatics

1 Answer

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Correct answer is (a) True

Explanation: The results of the word matching and attempts to extend the alignment are segments. They are called as HSPs (High-Scoring Segment Pairs). BLAST often produces several short HSPs rather than a single aligned region.

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