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In the web-based program MEME, the computation is a _____ step procedure.

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In the web-based program MEME, the computation is a _____ step procedure.

(a) one

(b) two

(c) three

(d) four

This question was addressed to me during an online exam.

My question is from Motif Discovery in Unaligned Sequences topic in section Sequence Alignment of Bioinformatics

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The correct option is (b) two

For explanation I would say: In constructing a probability matrix, it allows multiple starting alignments and does not assume that there are motifs in every sequence. Also, the computation is a two-step procedure that includes generation of sequence motif and finding highest score.

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