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The ______ refers to a structure with two ends of a single-stranded region (loop) connecting a base-paired region (stem).

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The ______ refers to a structure with two ends of a single-stranded region (loop) connecting a base-paired region (stem).

(a) helical junctions

(b) hairpin loop

(c) bulge loop

(d) interior loop

This question was posed to me by my college director while I was bunking the class.

My query is from Types of RNA Structures in portion RNA Structure Prediction of Bioinformatics

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The correct option is (b) hairpin loop

Easy explanation: The bulge loop refers to a single stranded region connecting two adjacent base-paired segments so that it “bubbles” out in the middle of a double helix on one side. The multi-branch loop is also called helical junctions.

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