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Which of the following is untrue about ConSite?

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Which of the following is untrue about ConSite?

(a) It is a web server that finds putative promoter elements

(b) It includes comparing two orthologous sequences

(c) The program does not accept pre-computed alignment

(d) The program accepts pre-computed alignment

This question was posed to me in homework.

My question is based upon Prediction Algorithms in section Promoter and Regulatory Element Prediction of Bioinformatics

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The correct answer is (c) The program does not accept pre-computed alignment

The best explanation: The user provides two individual sequences which are aligned by ConSite using a global alignment algorithm. Conserved regions are identified by calculating identity scores, which are then used to compare against a motif database of regulatory sites (TRANSFAC). High-scoring sequence segments upstream of genes are returned as putative regulatory elements.

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